No. words: 1021; after pruning: 995


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     4
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.3 (1,1:463)  442  0.00 0.00 0.00  BQ167580Td09P115B08P081B111F1_007.ab1        1   464 (52)  C BQ167580Td09P115B08P081B111R1_007.ab1   (41)   464     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BQ167580Td09P115B08P081B111R1_007.ab1   505 
   93    BQ167580Td09P115B08P081B111F1_007.ab1    52 
  101  C BQ167580Td09P115B08P081B111R1_007.ab1   405 
  141    BQ167580Td09P115B08P081B111F1_007.ab1   100 
  181  C BQ167580Td09P115B08P081B111R1_007.ab1   325 
  201    BQ167580Td09P115B08P081B111F1_007.ab1   160 
  245  C BQ167580Td09P115B08P081B111R1_007.ab1   261 
  249    BQ167580Td09P115B08P081B111F1_007.ab1   208 
  257  C BQ167580Td09P115B08P081B111R1_007.ab1   249 
  333    BQ167580Td09P115B08P081B111F1_007.ab1   292 
Contig length: old 557, new 557

Contig length: old 557, new 557
New start: 0