No. words: 1019; after pruning: 993


Histogram of relative pair offsets, for read pairs with multiple alignments:
46     4
92     2

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.9 (1,1:456)  431  0.00 0.00 0.00  BQ167580Td10P115B08P081B111F1_008.ab1        1   454 (52)  C BQ167580Td10P115B08P081B111R1_008.ab1   (56)   457     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C BQ167580Td10P115B08P081B111R1_008.ab1   513 
  336    BQ167580Td10P115B08P081B111F1_008.ab1   280 
  400  C BQ167580Td10P115B08P081B111R1_008.ab1   114 
  412    BQ167580Td10P115B08P081B111F1_008.ab1   356 
  420  C BQ167580Td10P115B08P081B111R1_008.ab1    94 
  428    BQ167580Td10P115B08P081B111F1_008.ab1   372 
  480  C BQ167580Td10P115B08P081B111R1_008.ab1    34 
  492    BQ167580Td10P115B08P081B111F1_008.ab1   436 
Contig length: old 562, new 562

Contig length: old 562, new 562
New start: 0