No. words: 923; after pruning: 897


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.7 (1,1:300)  299  0.00 0.00 0.00  BQ168655Ld07P081D05P081D111F1_095.ab1        1   301 (174)  C BQ168655Ld07P081D05P081D111R1_095.ab1   (147)   301     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C BQ168655Ld07P081D05P081D111R1_095.ab1   448 
  247    BQ168655Ld07P081D05P081D111F1_095.ab1   100 
  287  C BQ168655Ld07P081D05P081D111R1_095.ab1   162 
  299    BQ168655Ld07P081D05P081D111F1_095.ab1   152 
  415  C BQ168655Ld07P081D05P081D111R1_095.ab1    34 
  419    BQ168655Ld07P081D05P081D111F1_095.ab1   272 
Contig length: old 622, new 622

Contig length: old 622, new 622
New start: 0