No. words: 432; after pruning: 406


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 0.8 (1,1:156)  116  5.88 0.65 0.65  BQ169729As01P081F05P081F111F1_055.ab1        1   153 (53)  C BQ169729As01P081F05P081F111R1_055.ab1   (70)   156     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  52 nodes

 28 str. conn. components

Path
    1  C BQ169729As01P081F05P081F111R1_055.ab1   226 
   74    BQ169729As01P081F05P081F111F1_055.ab1     4 
Contig length: old 275, new 276

Contig length: old 276, new 276
New start: 0