No. words: 463; after pruning: 437


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.9 (1,1:175)  176  0.00 0.00 0.00  BQ171931Td07P115A10P081G111F1_009.ab1        1   176 (61)  C BQ171931Td07P115A10P081G111R1_009.ab1   (50)   176     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  90 nodes

 47 str. conn. components

Path
    1  C BQ171931Td07P115A10P081G111R1_009.ab1   226 
   82    BQ171931Td07P115A10P081G111F1_009.ab1    32 
   86  C BQ171931Td07P115A10P081G111R1_009.ab1   141 
   90    BQ171931Td07P115A10P081G111F1_009.ab1    40 
   94  C BQ171931Td07P115A10P081G111R1_009.ab1   133 
  102    BQ171931Td07P115A10P081G111F1_009.ab1    52 
  106  C BQ171931Td07P115A10P081G111R1_009.ab1   121 
  114    BQ171931Td07P115A10P081G111F1_009.ab1    64 
  122  C BQ171931Td07P115A10P081G111R1_009.ab1   105 
  134    BQ171931Td07P115A10P081G111F1_009.ab1    84 
  182  C BQ171931Td07P115A10P081G111R1_009.ab1    45 
  186    BQ171931Td07P115A10P081G111F1_009.ab1   136 
Contig length: old 287, new 287

Contig length: old 287, new 287
New start: 0