No. words: 1260; after pruning: 1234


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.8 (1,1:461)  437  0.87 0.00 0.00  BQ483083Ld03P081A06P081A121F1_087.ab1        1   462 (155)  C BQ483083Ld03P081A06P081A121R1_087.ab1   (181)   462     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  224 nodes

 114 str. conn. components

Path
    1  C BQ483083Ld03P081A06P081A121R1_087.ab1   643 
  453    BQ483083Ld03P081A06P081A121F1_087.ab1   272 
  457  C BQ483083Ld03P081A06P081A121R1_087.ab1   187 
  497    BQ483083Ld03P081A06P081A121F1_087.ab1   316 
  501  C BQ483083Ld03P081A06P081A121R1_087.ab1   143 
  505    BQ483083Ld03P081A06P081A121F1_087.ab1   324 
  509  C BQ483083Ld03P081A06P081A121R1_087.ab1   135 
  525    BQ483083Ld03P081A06P081A121F1_087.ab1   344 
  529  C BQ483083Ld03P081A06P081A121R1_087.ab1   115 
  545    BQ483083Ld03P081A06P081A121F1_087.ab1   364 
  557  C BQ483083Ld03P081A06P081A121R1_087.ab1    87 
  565    BQ483083Ld03P081A06P081A121F1_087.ab1   384 
  573  C BQ483083Ld03P081A06P081A121R1_087.ab1    71 
  577    BQ483083Ld03P081A06P081A121F1_087.ab1   396 
  581  C BQ483083Ld03P081A06P081A121R1_087.ab1    63 
  589    BQ483083Ld03P081A06P081A121F1_087.ab1   408 
  597  C BQ483083Ld03P081A06P081A121R1_087.ab1    47 
  601    BQ483083Ld03P081A06P081A121F1_087.ab1   420 
Contig length: old 798, new 798

Contig length: old 798, new 798
New start: 0