No. words: 1261; after pruning: 1235


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.1 (1,1:462)  414  1.73 0.43 0.22  BQ483083Ld04P081A06P081A121F1_085.ab1        1   462 (156)  C BQ483083Ld04P081A06P081A121R1_085.ab1   (180)   463     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C BQ483083Ld04P081A06P081A121R1_085.ab1   643 
  454    BQ483083Ld04P081A06P081A121F1_085.ab1   273 
  458  C BQ483083Ld04P081A06P081A121R1_085.ab1   186 
  470    BQ483083Ld04P081A06P081A121F1_085.ab1   289 
  478  C BQ483083Ld04P081A06P081A121R1_085.ab1   166 
  490    BQ483083Ld04P081A06P081A121F1_085.ab1   309 
  502  C BQ483083Ld04P081A06P081A121R1_085.ab1   142 
  510    BQ483083Ld04P081A06P081A121F1_085.ab1   329 
  514  C BQ483083Ld04P081A06P081A121R1_085.ab1   130 
  522    BQ483083Ld04P081A06P081A121F1_085.ab1   341 
  530  C BQ483083Ld04P081A06P081A121R1_085.ab1   114 
  542    BQ483083Ld04P081A06P081A121F1_085.ab1   361 
  558  C BQ483083Ld04P081A06P081A121R1_085.ab1    86 
  578    BQ483083Ld04P081A06P081A121F1_085.ab1   397 
  582  C BQ483083Ld04P081A06P081A121R1_085.ab1    62 
  586    BQ483083Ld04P081A06P081A121F1_085.ab1   405 
  590  C BQ483083Ld04P081A06P081A121R1_085.ab1    54 
  594    BQ483083Ld04P081A06P081A121F1_085.ab1   413 
  614  C BQ483083Ld04P081A06P081A121R1_085.ab1    30 
  618    BQ483083Ld04P081A06P081A121F1_085.ab1   437 
Contig length: old 798, new 799

Contig length: old 799, new 799
New start: 0