No. words: 1269; after pruning: 1243


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:470)  453  0.00 0.00 0.21  BQ483083Ld06P081A06P081A121F2_096.ab1        1   471 (146)  C BQ483083Ld06P081A06P081A121R2_096.ab1   (182)   470     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BQ483083Ld06P081A06P081A121R2_096.ab1   652 
  226    BQ483083Ld06P081A06P081A121F2_096.ab1    44 
  238  C BQ483083Ld06P081A06P081A121R2_096.ab1   415 
  242    BQ483083Ld06P081A06P081A121F2_096.ab1    60 
  254  C BQ483083Ld06P081A06P081A121R2_096.ab1   399 
  262    BQ483083Ld06P081A06P081A121F2_096.ab1    80 
  270  C BQ483083Ld06P081A06P081A121R2_096.ab1   383 
  278    BQ483083Ld06P081A06P081A121F2_096.ab1    96 
  290  C BQ483083Ld06P081A06P081A121R2_096.ab1   363 
  298    BQ483083Ld06P081A06P081A121F2_096.ab1   116 
  510  C BQ483083Ld06P081A06P081A121R2_096.ab1   143 
  554    BQ483083Ld06P081A06P081A121F2_096.ab1   372 
  574  C BQ483083Ld06P081A06P081A121R2_096.ab1    79 
  578    BQ483083Ld06P081A06P081A121F2_096.ab1   396 
  586  C BQ483083Ld06P081A06P081A121R2_096.ab1    67 
  590    BQ483083Ld06P081A06P081A121F2_096.ab1   408 
Contig length: old 798, new 799

Contig length: old 799, new 799
New start: 0