No. words: 1272; after pruning: 1246


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.2 (1,1:471)  454  0.00 0.00 0.21  BQ483083Ld10P081A06P081A121F2_088.ab1        1   472 (147)  C BQ483083Ld10P081A06P081A121R2_088.ab1   (182)   471     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C BQ483083Ld10P081A06P081A121R2_088.ab1   653 
  242    BQ483083Ld10P081A06P081A121F2_088.ab1    60 
  246  C BQ483083Ld10P081A06P081A121R2_088.ab1   408 
  266    BQ483083Ld10P081A06P081A121F2_088.ab1    84 
  270  C BQ483083Ld10P081A06P081A121R2_088.ab1   384 
  278    BQ483083Ld10P081A06P081A121F2_088.ab1    96 
  294  C BQ483083Ld10P081A06P081A121R2_088.ab1   360 
  298    BQ483083Ld10P081A06P081A121F2_088.ab1   116 
  430  C BQ483083Ld10P081A06P081A121R2_088.ab1   224 
  434    BQ483083Ld10P081A06P081A121F2_088.ab1   252 
  514  C BQ483083Ld10P081A06P081A121R2_088.ab1   140 
  542    BQ483083Ld10P081A06P081A121F2_088.ab1   360 
  550  C BQ483083Ld10P081A06P081A121R2_088.ab1   104 
  554    BQ483083Ld10P081A06P081A121F2_088.ab1   372 
  578  C BQ483083Ld10P081A06P081A121R2_088.ab1    76 
  590    BQ483083Ld10P081A06P081A121F2_088.ab1   408 
Contig length: old 800, new 801

Contig length: old 801, new 801
New start: 0