No. words: 1050; after pruning: 1024


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:481)  451  0.83 0.00 0.21  BQ483083Tu02P081A06P081A121F1_050.ab1        1   482 (36)  C BQ483083Tu02P081A06P081A121R1_050.ab1   (51)   481     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C BQ483083Tu02P081A06P081A121R1_050.ab1   532 
   68    BQ483083Tu02P081A06P081A121F1_050.ab1    17 
  100  C BQ483083Tu02P081A06P081A121R1_050.ab1   433 
  112    BQ483083Tu02P081A06P081A121F1_050.ab1    61 
  381  C BQ483083Tu02P081A06P081A121R1_050.ab1   152 
  510    BQ483083Tu02P081A06P081A121F1_050.ab1   459 
Contig length: old 568, new 569

Contig length: old 569, new 569
New start: 0