No. words: 1264; after pruning: 1238


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.2 (1,1:471)  450  0.00 0.00 0.21  CD452413Ld03P081C06P081C121F1_074.ab1        2   472 (173)  C CD452413Ld03P081C06P081C121R1_074.ab1   (149)   470     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C CD452413Ld03P081C06P081C121R1_074.ab1   619 
  197    CD452413Ld03P081C06P081C121F1_074.ab1    49 
  201  C CD452413Ld03P081C06P081C121R1_074.ab1   419 
  485    CD452413Ld03P081C06P081C121F1_074.ab1   337 
Contig length: old 792, new 793

Contig length: old 793, new 793
New start: 0