No. words: 1243; after pruning: 1217


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.2 (1,1:460)  449  0.22 0.00 0.00  CD452413Ld04P081C06P081C121F1_072.ab1        2   461 (173)  C CD452413Ld04P081C06P081C121R1_072.ab1   (149)   460     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  230 nodes

 117 str. conn. components

Path
    1  C CD452413Ld04P081C06P081C121R1_072.ab1   609 
  457    CD452413Ld04P081C06P081C121F1_072.ab1   309 
Contig length: old 782, new 782

Contig length: old 782, new 782
New start: 0