No. words: 1255; after pruning: 1229


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.4 (1,1:463)  447  0.00 0.00 0.00  CD452413Ld06P081C06P081C121F1_068.ab1        2   464 (153)  C CD452413Ld06P081C06P081C121R1_068.ab1   (175)   463     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  234 nodes

 119 str. conn. components

Path
    1  C CD452413Ld06P081C06P081C121R1_068.ab1   638 
  503    CD452413Ld06P081C06P081C121F1_068.ab1   329 
Contig length: old 791, new 791

Contig length: old 791, new 791
New start: 0