No. words: 1267; after pruning: 1241


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.5 (1,1:473)  449  0.21 0.00 0.21  CD452413Ld08P081C06P081C121F1_095.ab1        2   474 (171)  C CD452413Ld08P081C06P081C121R1_095.ab1   (150)   472     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  232 nodes

 118 str. conn. components

Path
    1  C CD452413Ld08P081C06P081C121R1_095.ab1   622 
  306    CD452413Ld08P081C06P081C121F1_095.ab1   157 
Contig length: old 793, new 794

Contig length: old 794, new 794
New start: 0