No. words: 1268; after pruning: 1242


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 8.4 (1,1:474)  453  0.00 0.21 0.00  CD452413Ld09P081C06P081C121F1_093.ab1        3   475 (180)  C CD452413Ld09P081C06P081C121R1_093.ab1   (139)   474     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C CD452413Ld09P081C06P081C121R1_093.ab1   613 
  469    CD452413Ld09P081C06P081C121F1_093.ab1   331 
Contig length: old 793, new 793

Contig length: old 793, new 793
New start: 0