No. words: 642; after pruning: 616


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    2   -1.8 -1.8 (1,1:176)  104 12.00 0.00 0.57  CD452526As02P081D06P081D121F2_085.ab1        3   177 (259)  C CD452526As02P081D06P081D121R2_085.ab1   (32)   174     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.8       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  40 nodes

 22 str. conn. components

Path
    1  C CD452526As02P081D06P081D121R2_085.ab1   206 
   36    CD452526As02P081D06P081D121F2_085.ab1     6 
   58  C CD452526As02P081D06P081D121R2_085.ab1   150 
   62    CD452526As02P081D06P081D121F2_085.ab1    32 
   66  C CD452526As02P081D06P081D121R2_085.ab1   142 
   70    CD452526As02P081D06P081D121F2_085.ab1    40 
   96  C CD452526As02P081D06P081D121R2_085.ab1   112 
  134    CD452526As02P081D06P081D121F2_085.ab1   104 
  160  C CD452526As02P081D06P081D121R2_085.ab1    48 
  168    CD452526As02P081D06P081D121F2_085.ab1   138 
  172  C CD452526As02P081D06P081D121R2_085.ab1    36 
  187    CD452526As02P081D06P081D121F2_085.ab1   157 
Contig length: old 465, new 466

Contig length: old 466, new 465
New start: 0 
D Change at: 49; seg lengths: entry 0, contig 1
S Change at: 81; seg lengths: entry 1, contig 1
S Change at: 105; seg lengths: entry 2, contig 2
S Change at: 139; seg lengths: entry 1, contig 1
S Change at: 193; seg lengths: entry 1, contig 1