No. words: 851; after pruning: 825


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 4.5 (1,1:351)  302  3.70 0.28 0.28  CD452526At02P081D06P081D121F2_096.ab1        1   351 (100)  C CD452526At02P081D06P081D121R2_096.ab1   (49)   351     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  132 nodes

 68 str. conn. components

Path
    1  C CD452526At02P081D06P081D121R2_096.ab1   400 
   53    CD452526At02P081D06P081D121F2_096.ab1     4 
   84  C CD452526At02P081D06P081D121R2_096.ab1   318 
   92    CD452526At02P081D06P081D121F2_096.ab1    43 
  155  C CD452526At02P081D06P081D121R2_096.ab1   246 
  165    CD452526At02P081D06P081D121F2_096.ab1   116 
  268  C CD452526At02P081D06P081D121R2_096.ab1   133 
  272    CD452526At02P081D06P081D121F2_096.ab1   223 
Contig length: old 499, new 500

Contig length: old 500, new 499
New start: 0 
D Change at: 80; seg lengths: entry 0, contig 1