No. words: 1170; after pruning: 1144


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 7.7 (1,1:421)  408  0.24 0.00 0.24  CD452526Ld01P081D06P081D121F1_085.ab1        4   422 (145)  C CD452526Ld01P081D06P081D121R1_085.ab1   (185)   418     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  206 nodes

 105 str. conn. components

Path
    1  C CD452526Ld01P081D06P081D121R1_085.ab1   603 
  441    CD452526Ld01P081D06P081D121F1_085.ab1   259 
Contig length: old 748, new 749

Contig length: old 749, new 749
New start: 0