No. words: 1160; after pruning: 1134


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.0 (1,1:410)  403  0.00 0.00 0.24  CD452526Ld10P081D06P081D121F1_088.ab1        1   411 (178)  C CD452526Ld10P081D06P081D121R1_088.ab1   (161)   410     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  204 nodes

 104 str. conn. components

Path
    1  C CD452526Ld10P081D06P081D121R1_088.ab1   571 
  477    CD452526Ld10P081D06P081D121F1_088.ab1   316 
Contig length: old 749, new 750

Contig length: old 750, new 750
New start: 0