No. words: 1213; after pruning: 1187


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.6 (1,1:439)  437  0.00 0.00 0.00  CD452526Ld12P081D06P081D121F1_084.ab1        3   440 (177)  C CD452526Ld12P081D06P081D121R1_084.ab1   (158)   438     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  220 nodes

 112 str. conn. components

Path
    1  C CD452526Ld12P081D06P081D121R1_084.ab1   596 
  478    CD452526Ld12P081D06P081D121F1_084.ab1   322 
Contig length: old 773, new 773

Contig length: old 773, new 773
New start: 0