No. words: 1472; after pruning: 1446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:555)  527  0.54 0.00 0.00  CD452844Ld02P081E06P081E121F1_090.ab1        1   556 (160)  C CD452844Ld02P081E06P081E121R1_090.ab1   (200)   556     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1  C CD452844Ld02P081E06P081E121R1_090.ab1   756 
  560    CD452844Ld02P081E06P081E121F1_090.ab1   360 
  564  C CD452844Ld02P081E06P081E121R1_090.ab1   193 
  612    CD452844Ld02P081E06P081E121F1_090.ab1   412 
  620  C CD452844Ld02P081E06P081E121R1_090.ab1   137 
  624    CD452844Ld02P081E06P081E121F1_090.ab1   424 
  628  C CD452844Ld02P081E06P081E121R1_090.ab1   129 
  632    CD452844Ld02P081E06P081E121F1_090.ab1   432 
  644  C CD452844Ld02P081E06P081E121R1_090.ab1   113 
  648    CD452844Ld02P081E06P081E121F1_090.ab1   448 
  652  C CD452844Ld02P081E06P081E121R1_090.ab1   105 
  664    CD452844Ld02P081E06P081E121F1_090.ab1   464 
  692  C CD452844Ld02P081E06P081E121R1_090.ab1    65 
  700    CD452844Ld02P081E06P081E121F1_090.ab1   500 
  708  C CD452844Ld02P081E06P081E121R1_090.ab1    49 
  712    CD452844Ld02P081E06P081E121F1_090.ab1   512 
  732  C CD452844Ld02P081E06P081E121R1_090.ab1    25 
  736    CD452844Ld02P081E06P081E121F1_090.ab1   536 
Contig length: old 916, new 916

Contig length: old 916, new 916
New start: 0