No. words: 1523; after pruning: 1497


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:601)  573  0.17 0.00 0.17  CD452844Ld04P081E06P081E121F1_086.ab1        1   602 (164)  C CD452844Ld04P081E06P081E121R1_086.ab1   (156)   601     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C CD452844Ld04P081E06P081E121R1_086.ab1   757 
  301    CD452844Ld04P081E06P081E121F1_086.ab1   146 
  317  C CD452844Ld04P081E06P081E121R1_086.ab1   441 
  601    CD452844Ld04P081E06P081E121F1_086.ab1   446 
  641  C CD452844Ld04P081E06P081E121R1_086.ab1   117 
  657    CD452844Ld04P081E06P081E121F1_086.ab1   502 
Contig length: old 921, new 921

Contig length: old 921, new 921
New start: 0