No. words: 1544; after pruning: 1518


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:620)  596  0.00 0.16 0.00  CD452844Ld07P081E06P081E121F1_094.ab1        1   621 (135)  C CD452844Ld07P081E06P081E121R1_094.ab1   (166)   622     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C CD452844Ld07P081E06P081E121R1_094.ab1   788 
  636    CD452844Ld07P081E06P081E121F1_094.ab1   469 
  644  C CD452844Ld07P081E06P081E121R1_094.ab1   145 
  660    CD452844Ld07P081E06P081E121F1_094.ab1   493 
  736  C CD452844Ld07P081E06P081E121R1_094.ab1    53 
  740    CD452844Ld07P081E06P081E121F1_094.ab1   573 
  752  C CD452844Ld07P081E06P081E121R1_094.ab1    37 
  764    CD452844Ld07P081E06P081E121F1_094.ab1   597 
Contig length: old 923, new 923

Contig length: old 923, new 923
New start: 0