No. words: 1538; after pruning: 1512


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:615)  595  0.00 0.00 0.00  CD452844Ld10P081E06P081E121F1_088.ab1        1   616 (134)  C CD452844Ld10P081E06P081E121R1_088.ab1   (172)   616     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C CD452844Ld10P081E06P081E121R1_088.ab1   788 
  636    CD452844Ld10P081E06P081E121F1_088.ab1   464 
  644  C CD452844Ld10P081E06P081E121R1_088.ab1   145 
  656    CD452844Ld10P081E06P081E121F1_088.ab1   484 
  672  C CD452844Ld10P081E06P081E121R1_088.ab1   117 
  676    CD452844Ld10P081E06P081E121F1_088.ab1   504 
  680  C CD452844Ld10P081E06P081E121R1_088.ab1   109 
  688    CD452844Ld10P081E06P081E121F1_088.ab1   516 
  712  C CD452844Ld10P081E06P081E121R1_088.ab1    77 
  720    CD452844Ld10P081E06P081E121F1_088.ab1   548 
  724  C CD452844Ld10P081E06P081E121R1_088.ab1    65 
  740    CD452844Ld10P081E06P081E121F1_088.ab1   568 
  752  C CD452844Ld10P081E06P081E121R1_088.ab1    37 
  764    CD452844Ld10P081E06P081E121F1_088.ab1   592 
Contig length: old 922, new 922

Contig length: old 922, new 922
New start: 0