No. words: 1415; after pruning: 1389


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.3 (1,1:641)  601  0.93 0.00 0.00  CD453612As02P081G06P081G121F1_009.ab1        1   642 (53)  C CD453612As02P081G06P081G121R1_009.ab1   (78)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C CD453612As02P081G06P081G121R1_009.ab1   720 
  137    CD453612As02P081G06P081G121F1_009.ab1    59 
  141  C CD453612As02P081G06P081G121R1_009.ab1   580 
  157    CD453612As02P081G06P081G121F1_009.ab1    79 
  161  C CD453612As02P081G06P081G121R1_009.ab1   560 
  265    CD453612As02P081G06P081G121F1_009.ab1   187 
  269  C CD453612As02P081G06P081G121R1_009.ab1   452 
  313    CD453612As02P081G06P081G121F1_009.ab1   235 
Contig length: old 773, new 773

Contig length: old 773, new 773
New start: 0