No. words: 1677; after pruning: 1651


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.4 (1,1:680)  618  1.03 0.00 0.29  CD453612Ld03P081G06P081G121F1_007.ab1        1   681 (154)  C CD453612Ld03P081G06P081G121R1_007.ab1   (163)   679     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C CD453612Ld03P081G06P081G121R1_007.ab1   842 
  354    CD453612Ld03P081G06P081G121F1_007.ab1   192 
  690  C CD453612Ld03P081G06P081G121R1_007.ab1   153 
  702    CD453612Ld03P081G06P081G121F1_007.ab1   540 
Contig length: old 996, new 997

Contig length: old 997, new 997
New start: 0