No. words: 767; after pruning: 741


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 0.5 (1,1:680)   58  5.88 1.18 1.18  CD453952As01P067E05P067E111F1_059.ab1      320   404 (0)  C CD453952As01P067E05P067E111R1_059.ab1   (0)   363   279 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  34 nodes

 19 str. conn. components

Path
    1    CD453952As01P067E05P067E111F1_059.ab1     1 
  327  C CD453952As01P067E05P067E111R1_059.ab1   356 
  331    CD453952As01P067E05P067E111F1_059.ab1   331 
  343  C CD453952As01P067E05P067E111R1_059.ab1   340 
  379    CD453952As01P067E05P067E111F1_059.ab1   379 
  383  C CD453952As01P067E05P067E111R1_059.ab1   300 
  395    CD453952As01P067E05P067E111F1_059.ab1   395 
  399  C CD453952As01P067E05P067E111R1_059.ab1   284 
Contig length: old 681, new 682

Contig length: old 682, new 682
New start: 0