No. words: 1231; after pruning: 1191


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:663)  542  0.18 0.00 0.00  CD453952As02P067E05P067E111F1_057.ab1        6   572 (0)  C CD453952As02P067E05P067E111R1_057.ab1   (0)   659    93 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  282 nodes

 143 str. conn. components

Path
    1    CD453952As02P067E05P067E111F1_057.ab1     1 
  241  C CD453952As02P067E05P067E111R1_057.ab1   424 
  253    CD453952As02P067E05P067E111F1_057.ab1   253 
  269  C CD453952As02P067E05P067E111R1_057.ab1   396 
  313    CD453952As02P067E05P067E111F1_057.ab1   313 
  381  C CD453952As02P067E05P067E111R1_057.ab1   284 
  401    CD453952As02P067E05P067E111F1_057.ab1   401 
  433  C CD453952As02P067E05P067E111R1_057.ab1   232 
Contig length: old 664, new 664

Contig length: old 664, new 664
New start: 0