No. words: 1294; after pruning: 1254


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:664)  561  0.17 0.17 0.00  CD453952At01P067E05P067E111F1_055.ab1        1   591 (0)  C CD453952At01P067E05P067E111R1_055.ab1   (37)   666    75 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C CD453952At01P067E05P067E111R1_055.ab1   703 
   60    CD453952At01P067E05P067E111F1_055.ab1    22 
  151  C CD453952At01P067E05P067E111R1_055.ab1   553 
  155    CD453952At01P067E05P067E111F1_055.ab1   117 
  207  C CD453952At01P067E05P067E111R1_055.ab1   497 
  219    CD453952At01P067E05P067E111F1_055.ab1   181 
  279  C CD453952At01P067E05P067E111R1_055.ab1   425 
  447    CD453952At01P067E05P067E111F1_055.ab1   409 
  451  C CD453952At01P067E05P067E111R1_055.ab1   253 
  483    CD453952At01P067E05P067E111F1_055.ab1   445 
  491  C CD453952At01P067E05P067E111R1_055.ab1   213 
Contig length: old 703, new 703

Contig length: old 703, new 703
New start: 0