No. words: 1129; after pruning: 1103


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 6.6 (1,1:519)  493  0.00 0.19 0.00  CD454852As01P081H06P081H121F1_016.ab1        4   520 (47)  C CD454852As01P081H06P081H121R1_016.ab1   (44)   518     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C CD454852As01P081H06P081H121R1_016.ab1   562 
  475    CD454852As01P081H06P081H121F1_016.ab1   433 
  491  C CD454852As01P081H06P081H121R1_016.ab1    72 
  507    CD454852As01P081H06P081H121F1_016.ab1   465 
  515  C CD454852As01P081H06P081H121R1_016.ab1    48 
  523    CD454852As01P081H06P081H121F1_016.ab1   481 
Contig length: old 609, new 609

Contig length: old 609, new 609
New start: 0