No. words: 1159; after pruning: 1133


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    9    0.0 8.7 (1,1:547)  518  0.00 0.19 0.00  CD454852At01P081H06P081H121F1_012.ab1       11   548 (30)  C CD454852At01P081H06P081H121R1_012.ab1   (42)   539     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 9       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  266 nodes

 135 str. conn. components

Path
    1  C CD454852At01P081H06P081H121R1_012.ab1   581 
   70    CD454852At01P081H06P081H121F1_012.ab1    37 
   82  C CD454852At01P081H06P081H121R1_012.ab1   500 
   94    CD454852At01P081H06P081H121F1_012.ab1    61 
  126  C CD454852At01P081H06P081H121R1_012.ab1   456 
  130    CD454852At01P081H06P081H121F1_012.ab1    97 
Contig length: old 611, new 611

Contig length: old 611, new 611
New start: 0