No. words: 1376; after pruning: 1350


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:529)  508  0.00 0.00 0.19  CD454852Ld06P081H06P081H121F1_010.ab1        1   530 (145)  C CD454852Ld06P081H06P081H121R1_010.ab1   (172)   529     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C CD454852Ld06P081H06P081H121R1_010.ab1   701 
  549    CD454852Ld06P081H06P081H121F1_010.ab1   377 
  557  C CD454852Ld06P081H06P081H121R1_010.ab1   145 
  597    CD454852Ld06P081H06P081H121F1_010.ab1   425 
Contig length: old 846, new 847

Contig length: old 847, new 847
New start: 0