No. words: 1118; after pruning: 1092


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.5 (1,1:518)  497  0.00 0.00 0.19  CD454852Tu01P081H06P081H121F1_003.ab1        1   519 (25)  C CD454852Tu01P081H06P081H121R1_003.ab1   (56)   518     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  258 nodes

 131 str. conn. components

Path
    1  C CD454852Tu01P081H06P081H121R1_003.ab1   574 
   72    CD454852Tu01P081H06P081H121F1_003.ab1    16 
   84  C CD454852Tu01P081H06P081H121R1_003.ab1   491 
   92    CD454852Tu01P081H06P081H121F1_003.ab1    36 
   96  C CD454852Tu01P081H06P081H121R1_003.ab1   479 
  100    CD454852Tu01P081H06P081H121F1_003.ab1    44 
  128  C CD454852Tu01P081H06P081H121R1_003.ab1   447 
  132    CD454852Tu01P081H06P081H121F1_003.ab1    76 
  180  C CD454852Tu01P081H06P081H121R1_003.ab1   395 
  184    CD454852Tu01P081H06P081H121F1_003.ab1   128 
Contig length: old 599, new 600

Contig length: old 600, new 600
New start: 0