No. words: 1122; after pruning: 1096


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 10.6 (1,1:517)  485  0.78 0.00 0.00  CD454852Tu02P081H06P081H121F1_001.ab1        1   514 (21)  C CD454852Tu02P081H06P081H121R1_001.ab1   (69)   518     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C CD454852Tu02P081H06P081H121R1_001.ab1   587 
   81    CD454852Tu02P081H06P081H121F1_001.ab1    12 
   93  C CD454852Tu02P081H06P081H121R1_001.ab1   495 
  117    CD454852Tu02P081H06P081H121F1_001.ab1    48 
  297  C CD454852Tu02P081H06P081H121R1_001.ab1   291 
  301    CD454852Tu02P081H06P081H121F1_001.ab1   232 
Contig length: old 604, new 604

Contig length: old 604, new 604
New start: 0