No. words: 1297; after pruning: 1271 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 3 0.0 8.9 (1,1:486) 470 0.00 0.41 0.00 (UMN172F)_D08_BE443276Ld06P166D03P166D061F1_058.ab1 1 483 (182) C (UMN172R)_D08_BE443276Ld06P166D03P166D061R1_058.ab1 (144) 488 4 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 3 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 238 nodes 121 str. conn. components Path 1 C (UMN172R)_D08_BE443276Ld06P166D03P166D061R1_058.ab1 632 194 (UMN172F)_D08_BE443276Ld06P166D03P166D061F1_058.ab1 48 198 C (UMN172R)_D08_BE443276Ld06P166D03P166D061R1_058.ab1 435 206 (UMN172F)_D08_BE443276Ld06P166D03P166D061F1_058.ab1 60 210 C (UMN172R)_D08_BE443276Ld06P166D03P166D061R1_058.ab1 423 226 (UMN172F)_D08_BE443276Ld06P166D03P166D061F1_058.ab1 80 230 C (UMN172R)_D08_BE443276Ld06P166D03P166D061R1_058.ab1 403 258 (UMN172F)_D08_BE443276Ld06P166D03P166D061F1_058.ab1 112 266 C (UMN172R)_D08_BE443276Ld06P166D03P166D061R1_058.ab1 367 302 (UMN172F)_D08_BE443276Ld06P166D03P166D061F1_058.ab1 156 498 C (UMN172R)_D08_BE443276Ld06P166D03P166D061R1_058.ab1 135 514 (UMN172F)_D08_BE443276Ld06P166D03P166D061F1_058.ab1 368 Contig length: old 810, new 811 Contig length: old 811, new 811 New start: 0