No. words: 1409; after pruning: 1383 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 11.9 (1,1:543) 538 0.00 0.00 0.18 (UMN172F)_D09_BE443349Ld02P166E03P166E061F1_073.ab1 1 544 (171) C (UMN172R)_D09_BE443349Ld02P166E03P166E061R1_073.ab1 (151) 543 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 1 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 270 nodes 137 str. conn. components Path 1 C (UMN172R)_D09_BE443349Ld02P166E03P166E061R1_073.ab1 694 179 (UMN172F)_D09_BE443349Ld02P166E03P166E061F1_073.ab1 28 183 C (UMN172R)_D09_BE443349Ld02P166E03P166E061R1_073.ab1 512 211 (UMN172F)_D09_BE443349Ld02P166E03P166E061F1_073.ab1 60 219 C (UMN172R)_D09_BE443349Ld02P166E03P166E061R1_073.ab1 476 227 (UMN172F)_D09_BE443349Ld02P166E03P166E061F1_073.ab1 76 235 C (UMN172R)_D09_BE443349Ld02P166E03P166E061R1_073.ab1 460 251 (UMN172F)_D09_BE443349Ld02P166E03P166E061F1_073.ab1 100 507 C (UMN172R)_D09_BE443349Ld02P166E03P166E061R1_073.ab1 188 511 (UMN172F)_D09_BE443349Ld02P166E03P166E061F1_073.ab1 360 587 C (UMN172R)_D09_BE443349Ld02P166E03P166E061R1_073.ab1 108 591 (UMN172F)_D09_BE443349Ld02P166E03P166E061F1_073.ab1 440 Contig length: old 865, new 866 Contig length: old 866, new 866 New start: 0