No. words: 1412; after pruning: 1386 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 10.8 (1,1:548) 531 0.73 0.18 0.00 (UMN172F)_C12_BE443349Ld14P166E03P166E061F1_092.ab1 1 548 (179) C (UMN172R)_C12_BE443349Ld14P166E03P166E061R1_092.ab1 (136) 549 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 268 nodes 136 str. conn. components Path 1 C (UMN172R)_C12_BE443349Ld14P166E03P166E061R1_092.ab1 685 359 (UMN172F)_C12_BE443349Ld14P166E03P166E061F1_092.ab1 222 387 C (UMN172R)_C12_BE443349Ld14P166E03P166E061R1_092.ab1 299 407 (UMN172F)_C12_BE443349Ld14P166E03P166E061F1_092.ab1 270 463 C (UMN172R)_C12_BE443349Ld14P166E03P166E061R1_092.ab1 223 515 (UMN172F)_C12_BE443349Ld14P166E03P166E061F1_092.ab1 378 527 C (UMN172R)_C12_BE443349Ld14P166E03P166E061R1_092.ab1 159 571 (UMN172F)_C12_BE443349Ld14P166E03P166E061F1_092.ab1 434 575 C (UMN172R)_C12_BE443349Ld14P166E03P166E061R1_092.ab1 111 591 (UMN172F)_C12_BE443349Ld14P166E03P166E061F1_092.ab1 454 651 C (UMN172R)_C12_BE443349Ld14P166E03P166E061R1_092.ab1 35 659 (UMN172F)_C12_BE443349Ld14P166E03P166E061F1_092.ab1 522 Contig length: old 863, new 864 Contig length: old 864, new 864 New start: 0