No. words: 1412; after pruning: 1386 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 1 0.0 11.2 (1,1:549) 536 0.73 0.00 0.00 (UMN172F)_D12_BE443349Ld15P166E03P166E061F1_090.ab1 2 550 (178) C (UMN172R)_D12_BE443349Ld15P166E03P166E061R1_090.ab1 (135) 549 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 1 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 268 nodes 136 str. conn. components Path 1 C (UMN172R)_D12_BE443349Ld15P166E03P166E061R1_090.ab1 684 330 (UMN172F)_D12_BE443349Ld15P166E03P166E061F1_090.ab1 196 338 C (UMN172R)_D12_BE443349Ld15P166E03P166E061R1_090.ab1 347 414 (UMN172F)_D12_BE443349Ld15P166E03P166E061F1_090.ab1 280 418 C (UMN172R)_D12_BE443349Ld15P166E03P166E061R1_090.ab1 267 482 (UMN172F)_D12_BE443349Ld15P166E03P166E061F1_090.ab1 348 498 C (UMN172R)_D12_BE443349Ld15P166E03P166E061R1_090.ab1 187 506 (UMN172F)_D12_BE443349Ld15P166E03P166E061F1_090.ab1 372 534 C (UMN172R)_D12_BE443349Ld15P166E03P166E061R1_090.ab1 151 582 (UMN172F)_D12_BE443349Ld15P166E03P166E061F1_090.ab1 448 650 C (UMN172R)_D12_BE443349Ld15P166E03P166E061R1_090.ab1 35 658 (UMN172F)_D12_BE443349Ld15P166E03P166E061F1_090.ab1 524 Contig length: old 862, new 862 Contig length: old 862, new 862 New start: 0