No. words: 1520; after pruning: 1494 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 12.0 (1,1:605) 584 0.17 0.33 0.00 (UMN173F)_B04_BE490700Ld03P176G01P176G041F1_030.ab1 1 605 (164) C (UMN173R)_B04_BE490700Ld03P176G01P176G041R1_030.ab1 (144) 607 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 298 nodes 151 str. conn. components Path 1 C (UMN173R)_B04_BE490700Ld03P176G01P176G041R1_030.ab1 751 240 (UMN173F)_B04_BE490700Ld03P176G01P176G041F1_030.ab1 94 288 C (UMN173R)_B04_BE490700Ld03P176G01P176G041R1_030.ab1 464 292 (UMN173F)_B04_BE490700Ld03P176G01P176G041F1_030.ab1 146 300 C (UMN173R)_B04_BE490700Ld03P176G01P176G041R1_030.ab1 452 324 (UMN173F)_B04_BE490700Ld03P176G01P176G041F1_030.ab1 178 340 C (UMN173R)_B04_BE490700Ld03P176G01P176G041R1_030.ab1 412 380 (UMN173F)_B04_BE490700Ld03P176G01P176G041F1_030.ab1 234 460 C (UMN173R)_B04_BE490700Ld03P176G01P176G041R1_030.ab1 292 540 (UMN173F)_B04_BE490700Ld03P176G01P176G041F1_030.ab1 394 580 C (UMN173R)_B04_BE490700Ld03P176G01P176G041R1_030.ab1 172 616 (UMN173F)_B04_BE490700Ld03P176G01P176G041F1_030.ab1 470 Contig length: old 914, new 915 Contig length: old 915, new 915 New start: 0