No. words: 1271; after pruning: 1245 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 12.8 (1,1:582) 567 0.00 0.00 0.17 (UMN172F)_H01_BE490700Tu02P176G01P176G041F1_001.ab1 1 583 (52) C (UMN172R)_H01_BE490700Tu02P176G01P176G041R1_001.ab1 (54) 582 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 290 nodes 147 str. conn. components Path 1 C (UMN172R)_H01_BE490700Tu02P176G01P176G041R1_001.ab1 636 311 (UMN172F)_H01_BE490700Tu02P176G01P176G041F1_001.ab1 258 355 C (UMN172R)_H01_BE490700Tu02P176G01P176G041R1_001.ab1 282 475 (UMN172F)_H01_BE490700Tu02P176G01P176G041F1_001.ab1 422 491 C (UMN172R)_H01_BE490700Tu02P176G01P176G041R1_001.ab1 146 519 (UMN172F)_H01_BE490700Tu02P176G01P176G041F1_001.ab1 466 567 C (UMN172R)_H01_BE490700Tu02P176G01P176G041R1_001.ab1 70 579 (UMN172F)_H01_BE490700Tu02P176G01P176G041F1_001.ab1 526 587 C (UMN172R)_H01_BE490700Tu02P176G01P176G041R1_001.ab1 50 595 (UMN172F)_H01_BE490700Tu02P176G01P176G041F1_001.ab1 542 607 C (UMN172R)_H01_BE490700Tu02P176G01P176G041R1_001.ab1 30 611 (UMN172F)_H01_BE490700Tu02P176G01P176G041F1_001.ab1 558 Contig length: old 688, new 688 Contig length: old 688, new 688 New start: 0