No. words: 1412; after pruning: 1386 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 4 0.0 7.9 (1,1:664) 637 0.30 0.15 0.30 (UMN172F)_H03_BE497784At02P176C02P176D051F1_017.ab1 5 666 (31) C (UMN172R)_H03_BE497784At02P176C02P176D051R1_017.ab1 (54) 661 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 4 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 322 nodes 163 str. conn. components Path 1 C (UMN172R)_H03_BE497784At02P176C02P176D051R1_017.ab1 715 64 (UMN172F)_H03_BE497784At02P176C02P176D051F1_017.ab1 13 68 C (UMN172R)_H03_BE497784At02P176C02P176D051R1_017.ab1 648 72 (UMN172F)_H03_BE497784At02P176C02P176D051F1_017.ab1 21 76 C (UMN172R)_H03_BE497784At02P176C02P176D051R1_017.ab1 640 80 (UMN172F)_H03_BE497784At02P176C02P176D051F1_017.ab1 29 84 C (UMN172R)_H03_BE497784At02P176C02P176D051R1_017.ab1 632 92 (UMN172F)_H03_BE497784At02P176C02P176D051F1_017.ab1 41 104 C (UMN172R)_H03_BE497784At02P176C02P176D051R1_017.ab1 612 112 (UMN172F)_H03_BE497784At02P176C02P176D051F1_017.ab1 61 120 C (UMN172R)_H03_BE497784At02P176C02P176D051R1_017.ab1 596 228 (UMN172F)_H03_BE497784At02P176C02P176D051F1_017.ab1 177 Contig length: old 747, new 748 Contig length: old 748, new 748 New start: 0