No. words: 1556; after pruning: 1530 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 11.9 (1,1:989) 539 0.35 0.18 0.00 (UMN173F)_G09_BE500510Ld07P176A03P176B061F1_067.ab1 130 694 (0) C (UMN173R)_G09_BE500510Ld07P176A03P176B061R1_067.ab1 (0) 862 297 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 0 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 276 nodes 140 str. conn. components Path 1 (UMN173F)_G09_BE500510Ld07P176A03P176B061F1_067.ab1 1 189 C (UMN173R)_G09_BE500510Ld07P176A03P176B061R1_067.ab1 802 193 (UMN173F)_G09_BE500510Ld07P176A03P176B061F1_067.ab1 193 245 C (UMN173R)_G09_BE500510Ld07P176A03P176B061R1_067.ab1 746 260 (UMN173F)_G09_BE500510Ld07P176A03P176B061F1_067.ab1 260 288 C (UMN173R)_G09_BE500510Ld07P176A03P176B061R1_067.ab1 703 296 (UMN173F)_G09_BE500510Ld07P176A03P176B061F1_067.ab1 296 300 C (UMN173R)_G09_BE500510Ld07P176A03P176B061R1_067.ab1 691 308 (UMN173F)_G09_BE500510Ld07P176A03P176B061F1_067.ab1 308 324 C (UMN173R)_G09_BE500510Ld07P176A03P176B061R1_067.ab1 667 348 (UMN173F)_G09_BE500510Ld07P176A03P176B061F1_067.ab1 348 352 C (UMN173R)_G09_BE500510Ld07P176A03P176B061R1_067.ab1 639 Contig length: old 990, new 990 Contig length: old 990, new 990 New start: 0