No. words: 1317; after pruning: 1291 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 13.7 (1,1:620) 613 0.00 0.00 0.16 (UMN172F)_E06_BE500863As01P176E03P176E061F1_040.ab1 1 621 (38) C (UMN172R)_E06_BE500863As01P176E03P176E061R1_040.ab1 (38) 620 1 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 1 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 304 nodes 154 str. conn. components Path 1 C (UMN172R)_E06_BE500863As01P176E03P176E061R1_040.ab1 658 436 (UMN172F)_E06_BE500863As01P176E03P176E061F1_040.ab1 398 460 C (UMN172R)_E06_BE500863As01P176E03P176E061R1_040.ab1 199 504 (UMN172F)_E06_BE500863As01P176E03P176E061F1_040.ab1 466 508 C (UMN172R)_E06_BE500863As01P176E03P176E061R1_040.ab1 151 536 (UMN172F)_E06_BE500863As01P176E03P176E061F1_040.ab1 498 580 C (UMN172R)_E06_BE500863As01P176E03P176E061R1_040.ab1 79 596 (UMN172F)_E06_BE500863As01P176E03P176E061F1_040.ab1 558 604 C (UMN172R)_E06_BE500863As01P176E03P176E061R1_040.ab1 55 608 (UMN172F)_E06_BE500863As01P176E03P176E061F1_040.ab1 570 620 C (UMN172R)_E06_BE500863As01P176E03P176E061R1_040.ab1 39 632 (UMN172F)_E06_BE500863As01P176E03P176E061F1_040.ab1 594 Contig length: old 696, new 697 Contig length: old 697, new 697 New start: 0