No. words: 1528; after pruning: 1502


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 11.4 (1,1:914)  591  0.33 0.00 0.16  (UMN173F)_A11_BE500863Ld05P176D03P176E061F1_095.ab1      100   711 (0)  C (UMN173R)_A11_BE500863Ld05P176D03P176E061R1_095.ab1   (2)   815   205 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1    (UMN173F)_A11_BE500863Ld05P176D03P176E061F1_095.ab1     1 
  332  C (UMN173R)_A11_BE500863Ld05P176D03P176E061R1_095.ab1   584 
Contig length: old 915, new 915

Contig length: old 915, new 915
New start: 0