No. words: 806; after pruning: 780


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.1 (1,1:350)  332  0.00 0.86 0.00  USDA022F_D08_BE425354Ta12P043G03P004F101F1_058.ab1        1   350 (60)  C USDA022R_D08_BE425354Ta12P043G03P004F101R1_058.ab1   (43)   353     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C USDA022R_D08_BE425354Ta12P043G03P004F101R1_058.ab1   396 
   69    USDA022F_D08_BE425354Ta12P043G03P004F101F1_058.ab1    23 
   73  C USDA022R_D08_BE425354Ta12P043G03P004F101R1_058.ab1   324 
   89    USDA022F_D08_BE425354Ta12P043G03P004F101F1_058.ab1    43 
  109  C USDA022R_D08_BE425354Ta12P043G03P004F101R1_058.ab1   288 
  121    USDA022F_D08_BE425354Ta12P043G03P004F101F1_058.ab1    75 
  125  C USDA022R_D08_BE425354Ta12P043G03P004F101R1_058.ab1   272 
  133    USDA022F_D08_BE425354Ta12P043G03P004F101F1_058.ab1    87 
  149  C USDA022R_D08_BE425354Ta12P043G03P004F101R1_058.ab1   248 
  205    USDA022F_D08_BE425354Ta12P043G03P004F101F1_058.ab1   159 
  341  C USDA022R_D08_BE425354Ta12P043G03P004F101R1_058.ab1    56 
  345    USDA022F_D08_BE425354Ta12P043G03P004F101F1_058.ab1   299 
Contig length: old 455, new 456

Contig length: old 456, new 456
New start: 0