No. words: 1673; after pruning: 1619


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 16.0 (1,1:897)  730  0.27 0.00 0.13  USDA018F_E02_BE443531Ta13P029G10P017D101F1_008.ab1      149   891 (32)  C USDA018R_E02_BE443531Ta13P029G10P017D101R1_008.ab1   (0)   750     9 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1    USDA018F_E02_BE443531Ta13P029G10P017D101F1_008.ab1     1 
  493  C USDA018R_E02_BE443531Ta13P029G10P017D101R1_008.ab1   406 
  881    USDA018F_E02_BE443531Ta13P029G10P017D101F1_008.ab1   881 
Contig length: old 923, new 923

Contig length: old 923, new 923
New start: 0