No. words: 1675; after pruning: 1649


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.6 (1,1:900)  742  0.00 0.00 0.13  USDA018F_A03_BE443531Ta17P029G10P017D101F1_031.ab1      151   902 (22)  C USDA018R_A03_BE443531Ta17P029G10P017D101R1_031.ab1   (0)   751     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  376 nodes

 190 str. conn. components

Path
    1    USDA018F_A03_BE443531Ta17P029G10P017D101F1_031.ab1     1 
  202  C USDA018R_A03_BE443531Ta17P029G10P017D101R1_031.ab1   700 
  206    USDA018F_A03_BE443531Ta17P029G10P017D101F1_031.ab1   206 
  398  C USDA018R_A03_BE443531Ta17P029G10P017D101R1_031.ab1   504 
  882    USDA018F_A03_BE443531Ta17P029G10P017D101F1_031.ab1   882 
  891  C USDA018R_A03_BE443531Ta17P029G10P017D101R1_031.ab1    12 
  899    USDA018F_A03_BE443531Ta17P029G10P017D101F1_031.ab1   899 
Contig length: old 924, new 924

Contig length: old 924, new 924
New start: 0