No. words: 913; after pruning: 887


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 0.6 (1,1:883)   29  0.00 0.00 0.00  USDA018F_B03_BE443531Ta18P029G10P017D101F1_029.ab1      150   178 (0)  C USDA018R_B03_BE443531Ta18P029G10P017D101R1_029.ab1   (0)   735   707 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  16 nodes

 10 str. conn. components

Path
    1    USDA018F_B03_BE443531Ta18P029G10P017D101F1_029.ab1     1 
  173  C USDA018R_B03_BE443531Ta18P029G10P017D101R1_029.ab1   712 
Contig length: old 884, new 884

Contig length: old 884, new 884
New start: 0