No. words: 1713; after pruning: 1687 Histogram of relative pair offsets, for read pairs with multiple alignments: Pass 1 Gap Score Pass: 1 #reads #contigs (not counting singlets) 1 2 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Pass 3 Gap Score Merge:(0) 0 0.0 12.9 (1,1:1051) 634 0.60 0.00 0.15 USDA005R3_H05_BE443588Ld02P004A05A11R3_033.ab1 206 867 (0) C USDA005F3_H05_BE443588Ld02P004A05A11F3_033.ab1 (0) 846 186 * Pass: 3 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score 0.0 1 0 Gap # merges # failures size 0 1 0 Offset 1 1 Pass 4 Gap Score Pass: 4 #reads #contigs (not counting singlets) 2 1 N.B. Following not based on all pairs!! Lowest # merges # failures LLR score Gap # merges # failures size Offset Read equivalence class histogram: 2 1 Chimera merges: Contig 1: 318 nodes 161 str. conn. components Path 1 USDA005R3_H05_BE443588Ld02P004A05A11R3_033.ab1 1 375 C USDA005F3_H05_BE443588Ld02P004A05A11F3_033.ab1 678 399 USDA005R3_H05_BE443588Ld02P004A05A11R3_033.ab1 399 403 C USDA005F3_H05_BE443588Ld02P004A05A11F3_033.ab1 650 407 USDA005R3_H05_BE443588Ld02P004A05A11R3_033.ab1 407 411 C USDA005F3_H05_BE443588Ld02P004A05A11F3_033.ab1 642 419 USDA005R3_H05_BE443588Ld02P004A05A11R3_033.ab1 419 427 C USDA005F3_H05_BE443588Ld02P004A05A11F3_033.ab1 626 431 USDA005R3_H05_BE443588Ld02P004A05A11R3_033.ab1 431 439 C USDA005F3_H05_BE443588Ld02P004A05A11F3_033.ab1 614 443 USDA005R3_H05_BE443588Ld02P004A05A11R3_033.ab1 443 451 C USDA005F3_H05_BE443588Ld02P004A05A11F3_033.ab1 602 459 USDA005R3_H05_BE443588Ld02P004A05A11R3_033.ab1 459 463 C USDA005F3_H05_BE443588Ld02P004A05A11F3_033.ab1 590 Contig length: old 1052, new 1052 Contig length: old 1052, new 1052 New start: 0