No. words: 1534; after pruning: 1508


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.3 (1,1:1012)  450  2.88 0.00 0.19  USDA018F_G08_BE443797Ta15P035B03P004A101F1_052.ab1      199   719 (0)  C USDA018R_G08_BE443797Ta15P035B03P004A101R1_052.ab1   (0)   815   296 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  214 nodes

 109 str. conn. components

Path
    1    USDA018F_G08_BE443797Ta15P035B03P004A101F1_052.ab1     1 
  421  C USDA018R_G08_BE443797Ta15P035B03P004A101R1_052.ab1   593 
Contig length: old 1013, new 1013

Contig length: old 1013, new 1013
New start: 0 
S Change at: 206; seg lengths: entry 1, contig 1